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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs2933853 chr8:71909222 T/C XKR9 chr8:71581600-71702606:+ 0.67 6.56 2.46E-8 Box Plot
ACC rs2948102 chr3:20045701 A/T EFHB chr3:19920964-19988517:- 0.71 5.96 2.22E-7 Box Plot
ACC rs2949955 chr6:58667612 A/G GUSBL2 chr6:58246159-58287724:- 0.67 5.47 1.31E-6 Box Plot
ACC rs2956610 chr8:71929533 T/C XKR9 chr8:71581600-71702606:+ 0.65 6.17 1.03E-7 Box Plot
ACC rs2958781 chr8:30117900 C/T DCTN6 chr8:30013813-30041156:+ 0.92 5.3 2.35E-6 Box Plot
ACC rs2961008 chr7:72187273 T/G TYW1B chr7:72023729-72298777:- 0.97 5.59 8.46E-7 Box Plot
ACC rs2969379 chr2:99776686 G/A TSGA10 chr2:99613724-99771427:- 0.56 5.64 7.08E-7 Box Plot
ACC rs2998259 chr6:58659970 G/A GUSBL2 chr6:58246159-58287724:- 0.67 5.47 1.31E-6 Box Plot
ACC rs3008276 chr8:189364 T/C RPL23AP53 chr8:163186-182231:- 0.75 5.07 5.3E-6 Box Plot
ACC rs3020513 chr10:135364915 T/C CYP2E1 chr10:135333910-135374724:+ 0.59 5.21 3.29E-6 Box Plot
ACC rs3033504 chr14:65392542 CGTT/C CHURC1 chr14:65381079-65411309:+ 0.79 5.19 3.5E-6 Box Plot
ACC rs3042727 chr11:60159425 GAA/G MS4A14 chr11:60146003-60185229:+ 0.4 5.92 2.61E-7 Box Plot
ACC rs3072919 chr20:44150146 ATT/AT WFDC3 chr20:44376583-44420571:- 0.79 5.12 4.52E-6 Box Plot
ACC rs3080069 chr20:44370690 A/ATTTT WFDC3 chr20:44376583-44420571:- 0.81 5.53 1.06E-6 Box Plot
ACC rs3085692 chr8:71701964 A/ATAAATTC XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot